-
entry point to its
search function, the
latter being a
faster iteration.
HHpred is an
online server for
protein structure prediction that uses homology...
-
automatically updated fold library,
genome searching and
other facilities HHpred Template detection, alignment, 3D
modeling Interactive webserver with help...
-
programming Richard James Boys
Conditional random field Estimation theory HHpred /
HHsearch free
server and
software for
protein sequence searching HMMER...
-
nucleotide sequences of all
genomes sequenced, not just that of phages.
HHPred detects homology in the
sequences with
other proteins that have had their...
- is also
significantly different from
those profile-based
methods (e.g.,
HHPred and Phyre2) in that
RaptorX excels at
modeling of
protein sequences without...
- ReformAlign, PyMOD, TIP-STRUCTFAST, COMP****, 3d-PSSM, SAMT02, SAMT99,
HHPRED, ****UE, 3D-JIGSAW, META-PP, ROSETTA, and I-T****ER.[page needed] Protein...
- The
domain organization of OBPgp279. The E-values for OBP
domains predicted by
HHpred are
shown below the
respective domains....
-
sequences based on the
pairwise comparison of HMMs. A
server running HHsearch (
HHpred) was the
fastest of 10
automatic structure prediction servers in the CASP7...
-
recent successful methods based on the CASP
experiments include I-T****ER,
HHpred and AlphaFold. In 2021,
AlphaFold was
reported as
currently having the best...
-
indeed many of the same
algorithms have been
applied to both problems.
HHpred is a po****r
threading server which runs HHsearch, a
widely used software...
