Definition of BLASTX. Meaning of BLASTX. Synonyms of BLASTX

- known protein translations, we can only search for them using tBLASTn. BLASTx BLASTx compares a nucleotide query sequence, which can be translated into six...
- sequences with a hit in BLASTX, the program predicts the coding regions based on the translation reading frames identified in BLASTX alignments, otherwise...
- shared-host GPUs Protein Liu Y, Maskell DL and Schmidt B 2009/2010 DIAMOND BLASTX and BLASTP aligner based on double indexing Protein Buchfink B, Xie C, Huson...
- sequences (reads) against the nr protein database using BLASTx search. The generated BLASTx output is then taken as input by the SOrt-ITEMS program....
- comparison can be performed on translated amino acid sequences (e.g. BLASTp, tBLASTx) to identify ancient duplications or on DNA nucleotide sequences (e.g. BLASTn...
- classification system based on annotation of the 5 ‘best hit’ matches in BLASTX searches. All D. melanogaster matches were cataloged using FlyBase. Nearly...
- homology-based gene identification methods (e.g. querying protein databases with BLASTX). Overall, the structure of the model used in GENSCAN is similar to the...
- prediction: ab-initio gene prediction using a Hidden Markov model based method BlastX Automatic annotation transfer using BlastP Metabolic Pathway Builder integrates...
- helianthus species and the genomes of retrotransposons were identified using BLASTX analysis. Phylogenetic trees were constructed using neighbor-joining clustering...
- and function, and lower-score reads are aligned with the more sensitive BLASTX and eventually can be aligned in protein databases so that their function...